dbRES: Statistics Report
dbRES now contains all together
5437 RNA edit site data. dbRES covers altogether
95 organisms
from
251 transcripts. All these data are manually collected from literatures or the Gene Bank database.
The statistic report for different RNA Editing Site type is shown as the following, with a histgram showing the relative percentage of the site numbers.
|
RNA Edit Type |
Count |
Percentage |
Histogram |
C to U RNA editing | 4539 | 83.48% | | A to G RNA editing | 107 | 1.97% | | U to C RNA editing | 702 | 12.91% | | G insertion RNA editing | 1 | 0.02% | | C insertion RNA editing | 58 | 1.07% | | G deletion RNA editing | 1 | 0.02% | | A to C RNA editing | 2 | 0.04% | | G to C RNA editing | 3 | 0.06% | | G to A RNA editing | 8 | 0.15% | | U insertion RNA editing | 2 | 0.04% | | A insertion RNA editing | 3 | 0.06% | | C/U insertion RNA editing | 4 | 0.07% | | AA insertion RNA editing | 3 | 0.06% | | A to U RNA editing | 1 | 0.02% | | GG to AA RNA editing | 2 | 0.04% | | AA to GG RNA editing | 1 | 0.02% | |
The statistic report for different species is shown as the following, with a histogram showing the relative percentage of the site numbers, to clear shown the histogram, the length of the red bar is enlarged 3 times.
|
Organism |
Count |
Percentage |
Histogram |
Acorus calamus | 8 | 0.15% | | Adiantum capillus-veneris | 350 | 6.44% | | Aegilops crassa | 10 | 0.18% | | Allium cepa | 2 | 0.04% | | Allium porrum | 1 | 0.02% | | Allium sativum | 2 | 0.04% | | Aloe vera | 2 | 0.04% | | Amphicarpaea bracteata | 13 | 0.24% | | Angiopteris palmiformis | 4 | 0.07% | | Anthoceros crispulus | 21 | 0.39% | | Anthoceros formosae | 975 | 17.93% | | Anthoceros husnotii | 38 | 0.70% | | Anthoceros punctatus | 52 | 0.96% | | Antirrhinum majus | 2 | 0.04% | | Arabidopsis thaliana | 551 | 10.13% | | Asplenium nidus | 39 | 0.72% | | Bazzania trilobata | 5 | 0.09% | | Beta vulgaris | 80 | 1.47% | | Beta vulgaris subsp. vulgaris | 14 | 0.26% | | Brassica napus | 499 | 9.18% | | Brassica oleracea | 47 | 0.86% | | Ceratodon purpureus | 1 | 0.02% | | Cologania lemmonii | 14 | 0.26% | | Cucumis sativus | 12 | 0.22% | | Cycas revoluta | 47 | 0.86% | | Daucus carota | 60 | 1.10% | | Drosophila melanogaster | 45 | 0.83% | | Dumasia villosa | 13 | 0.24% | | Elymus sibiricus | 25 | 0.46% | | Ephedra gerardiana | 15 | 0.28% | | Equisetum arvense | 7 | 0.13% | | Fusarium oxysporum | 2 | 0.04% | | Ginkgo biloba | 13 | 0.24% | | Glycine max | 2 | 0.04% | | Helianthus annuus | 8 | 0.15% | | Hepatitis delta virus | 6 | 0.11% | | Homo sapiens | 34 | 0.63% | | Hordeum vulgare | 9 | 0.17% | | Hordeum vulgare subsp. vulgare | 8 | 0.15% | | Human immunodeficiency virus 1 | 4 | 0.07% | | Hypnum imponens | 5 | 0.09% | | Isoetes flaccida | 5 | 0.09% | | Isoetes lacustris | 116 | 2.13% | | Juniperus procera | 28 | 0.51% | | Larix sp. | 26 | 0.48% | | Leiosporoceros dussii | 8 | 0.15% | | Lespedeza formosa | 13 | 0.24% | | Loligo pealei | 20 | 0.37% | | Megaceros flagellaris | 43 | 0.79% | | Megaceros fuegiensis | 44 | 0.81% | | Megaceros sp. | 11 | 0.20% | | Moerckia flotoviana | 29 | 0.53% | | Mus musculus | 12 | 0.22% | | Nephrolepis exaltata | 3 | 0.06% | | Nicotiana sylvestris | 35 | 0.64% | | Nicotiana tabacum | 12 | 0.22% | | Nicotiana tomentosiformis | 34 | 0.63% | | Nothoceros sp. JC522 | 65 | 1.20% | | Oenothera berteroana | 158 | 2.91% | | Olea europaea subsp. europaea | 14 | 0.26% | | Ophioglossum petiolatum | 25 | 0.46% | | Oryza sativa | 489 | 8.99% | | Osmunda claytoniana | 9 | 0.17% | | Osmunda regalis | 3 | 0.06% | | Pellia epiphylla | 13 | 0.24% | | Peperomia polybotrya | 10 | 0.18% | | Petunia x hybrida | 11 | 0.20% | | Pfiesteria piscicida | 34 | 0.63% | | Phaeoceros carolinianus | 74 | 1.36% | | Phaeoceros fimbriatus | 78 | 1.43% | | Phaeoceros pearsonii | 67 | 1.23% | | Phaeoceros sp. Duckett 1-17-04 | 47 | 0.86% | | Phymatoceros bulbiculosus | 52 | 0.96% | | Physarum polycephalum | 69 | 1.27% | | Physcomitrella patens | 1 | 0.02% | | Physcomitrella patens subsp. patens | 1 | 0.02% | | Picea abies | 34 | 0.63% | | Picea sitchensis | 5 | 0.09% | | Pinus sibirica | 30 | 0.55% | | Pinus sylvestris | 29 | 0.53% | | Pisum sativum | 46 | 0.85% | | Plagiopus oederi | 1 | 0.02% | | Rattus norvegicus | 5 | 0.09% | | Secale cereale | 10 | 0.18% | | Solanum tuberosum | 34 | 0.63% | | Sorghum bicolor | 25 | 0.46% | | Spinacia oleracea | 1 | 0.02% | | Tetraphis pellucida | 1 | 0.02% | | Thuja plicata | 26 | 0.48% | | Tmesipteris elongata | 7 | 0.13% | | Triticum aestivum | 217 | 3.99% | | Vitis vinifera | 21 | 0.39% | | Zamia sp. | 15 | 0.28% | | Zea mays | 201 | 3.70% | | Zea perennis | 25 | 0.46% | |
The statistics sequence logo is shown below.
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